Transport System Comparison

Comparision of Transporters from Different Organisms

	A. fulgidus DSM4304	A. pernix K1	Halobacterium sp. NRC-1	M. acetivorans C2A	M. jannaschii DSM	M. kandleri AV19	M. maripaludis S2	M. mazei Goe1	M. thermoautotrophicum deltaH	N. equitans Kin4-M	P. abyssi GE5	P. aerophilum IM2	P. furiosus DSM3638	P. horikoshii OT3	P. torridus DSM9790	S. solfataricus P2	S. tokodaii strain7	T. acidophilum DSM1728	T. volcanium GSS1
Genome Size(Mb):	2.18	1.67	2.57	5.75	1.66	1.69	1.66	4.1	1.75	0.5	1.77	2.22	1.91	1.8	1.55	2.99	2.81	1.56	1.58
Total Transporter Proteins:	103	78	104	215	46	36	88	162	66	16	93	74	103	92	114	126	133	103	115
No. of Transporters per Mb genome:	47.25	46.71	40.47	37.39	27.71	21.3	53.01	39.51	37.71	32	52.54	33.33	53.93	51.11	73.55	42.14	47.33	66.03	72.78

ATP-Dependent	37 (36%)	44 (56%)	41 (39%)	103 (48%)	15 (33%)	11 (31%)	33 (38%)	62 (38%)	26 (39%)	8 (50%)	33 (35%)	47 (64%)	43 (42%)	34 (37%)	26 (23%)	40 (32%)	39 (29%)	30 (29%)	28 (24%)
ABC family	33	39	35	91	13	9	26	51	17	3	28	42	40	33	20	37	31	23	20
ArsAB family	0	3	2	0	1	1	1	0	1	0	2	2	0	0	2	0	0	2	3
F-ATPase family	1	1	1	2	0	1	1	1	1	5	2	1	1	1	1	1	7	1	1
H+-PPase family	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0
IISP family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MPT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
P-ATPase family	3	1	3	9	1	0	5	9	7	0	1	1	2	0	3	2	1	4	4

Ion Channels	6 (6%)	5 (6%)	6 (6%)	17 (8%)	4 (9%)	5 (14%)	7 (8%)	13 (8%)	6 (9%)	3 (19%)	6 (6%)	1 (1%)	5 (5%)	4 (4%)	4 (4%)	6 (5%)	4 (3%)	3 (3%)	5 (4%)
ACC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Annexin family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bcl-2 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Bestrophin family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CD20 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ClC family	1	2	1	1	1	1	0	1	0	0	2	0	0	1	1	1	1	1	1
Connexin family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CytB family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E-ClC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ENaC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GIC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Hsp70 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ICC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ICln family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Innexin family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
IRK-C family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
LIC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Mid1 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MIP family	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0
MIT family	1	0	0	1	1	0	2	1	0	1	0	0	1	1	0	0	0	0	0
MscL family	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
MscS family	1	2	3	8	0	1	3	7	1	2	1	1	2	1	2	3	2	1	2
NSCC2 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
O-ClC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
PCC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
PLM family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
RIR-CaC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Tic110 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TRP-CC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
UAC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
UT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
VIC family	2	1	2	6	2	3	1	3	4	0	3	0	2	1	1	1	1	1	2

Phosphotransferase System (PTS)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)
GPTS family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
SSPTS family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Secondary Transporter	56 (54%)	27 (35%)	56 (54%)	87 (40%)	26 (57%)	19 (53%)	47 (53%)	78 (48%)	30 (45%)	5 (31%)	52 (56%)	25 (34%)	51 (50%)	54 (59%)	84 (74%)	81 (64%)	90 (68%)	70 (68%)	81 (70%)
AAA family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AAAP family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AAE family	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AbgT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ACR3 family	1	0	0	1	0	0	0	1	1	0	0	0	1	2	0	0	0	0	0
AE family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AEC family	0	0	0	0	1	1	1	1	1	0	0	0	1	0	0	0	0	0	0
AGCS family	0	0	0	1	0	0	1	1	0	0	1	0	1	1	0	0	0	0	0
Amt family	3	0	0	3	2	1	2	2	2	0	0	0	0	0	1	1	1	2	1
APC family	2	1	4	5	2	1	1	6	1	0	0	1	0	0	15	14	18	16	21
ArsB family	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	1	1	0	0
BASS family	0	0	0	2	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0
BCCT family	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
BenE family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CaCA family	1	0	1	3	1	2	2	2	2	1	1	1	1	1	0	1	1	0	0
CadD family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CCC family	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CCS family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CDF family	2	1	1	8	1	1	1	9	2	0	1	3	2	1	0	2	1	0	0
CHR family	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CitMHS family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CNT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CPA1 family	1	0	1	2	2	1	1	2	1	0	1	0	0	0	1	0	0	1	1
CPA2 family	2	1	0	3	1	2	4	4	1	0	4	1	4	4	1	3	4	1	1
CPA3 family	0	0	1	1	0	0	1	0	1	0	4	0	3	3	0	0	0	0	0
DAACS family	0	1	1	2	0	0	0	1	0	0	1	0	1	1	0	0	0	0	0
DASS family	0	0	1	0	2	0	1	0	1	0	1	1	1	1	0	0	0	0	0
Dcu family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
DcuC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
DMT family	8	4	3	6	0	1	3	9	2	0	6	3	7	7	3	2	6	4	3
ENT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ESS family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
FBT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
FNT family	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
GntP family	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
GPH family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GUP family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HAAAP family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ICT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
KDGT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
KUP family	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
LCT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
LctP family	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0
LIV-E family	1	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0
LIVCS family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
LysE family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MET family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MFS family	15	8	8	14	2	2	6	7	3	0	13	12	10	12	51	45	44	34	47
MOP family	2	2	7	13	3	1	6	14	7	1	5	0	5	5	2	0	1	2	0
MSS family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MTC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
NCS1 family	0	1	0	0	0	0	1	0	0	0	1	0	1	1	1	3	2	2	1
NCS2 family	0	0	1	0	0	0	2	0	0	0	2	0	2	1	0	0	0	0	0
NhaA family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
NhaB family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
NhaC family	0	1	3	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0
NhaD family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
NiCoT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0
Nramp family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	1	1
NSS family	1	0	3	2	1	0	1	0	0	0	1	0	2	1	0	0	0	0	0
OAT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
OPT family	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0
OST family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Oxa1 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
PiT family	2	0	7	1	1	1	0	1	1	0	2	1	2	2	1	1	1	2	2
PNaS family	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
POT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
RFC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
RhtB family	1	1	0	2	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0
RND family	2	1	3	6	3	2	1	3	1	2	2	1	2	3	3	1	3	1	0
SBT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
SSS family	6	1	2	3	0	0	3	4	1	0	3	0	1	2	1	2	2	1	2
SulP family	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
Tat family	1	1	1	1	0	1	0	1	0	0	0	1	0	0	1	1	3	1	1
TDT family	1	0	0	0	2	0	0	0	0	1	1	0	0	1	2	0	0	1	0
ThrE family	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
TRAP-T family	3	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Trk family	1	1	3	3	1	1	1	2	1	0	1	0	2	1	0	0	0	0	0
TTT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ZIP family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Unclassified	5 (5%)	3 (4%)	1 (1%)	8 (4%)	1 (2%)	1 (3%)	1 (1%)	9 (6%)	4 (6%)	0 (0%)	2 (2%)	1 (1%)	4 (4%)	1 (1%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)	1 (1%)
Ctr1 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Ctr2 family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
FeoB family	2	0	0	2	1	1	1	4	2	0	1	1	2	1	0	0	0	0	0
FeT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
FP family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
LPI family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MerTP family	1	1	1	4	0	0	0	3	0	0	0	0	1	0	0	0	0	0	1
MgtE family	1	1	0	2	0	0	0	2	2	0	1	0	1	0	0	0	0	0	0
OFeT family	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
PbrT family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
PnuC family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
PPI family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
PUP family	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Color Schema
Transporter Count	0	1-5	6-10	11-20	21-30	31-40	41-50	51-60	61-80	81-100	100-120	120-150	>150

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